Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802012.1_cds_XP_016477818.1_6925
CDS Infomation

[gene=LOC107799239] [db_xref=GeneID:107799239] [protein=uncharacterized protein LOC107799239] [protein_id=XP_016477818.1] [location=join(3576..4322,4587..4784,5980..6306,6732..6795,7653..7870,7959..8072,8801..8906,9039..9250,13100..13203,13378..13522)] [gbkey=CDS]
Sequence

ATGGCCGGTACTTCCAACCCCAAAACCCTAAACAAAACCCTTCTTCTTTCACAATCCCAA
TCCTTACCCTCAGCTCTCGCGGACGATGACGATTTTCAAGATCCATCTCCTTCTCAGCTC
CGATTGTCAAAACCCACCTCAACAATTCCCTCCCGTAAGCCTCTTGCACCTTATAATAAT
AACACTGCCAGTGCTTCTCGCTCTTCCAAGAAGCCAAAACAGCATCCACTACACGGCGGC
AAGGAGAACTTAAGTGTTGTTGGAAAGTGTGCTAAGGGTTCGGATTCGGGTCATAAATTG
GATAGTTATCGTCCTACAAAGAAGCCAAAACAACAGCCACTAATTTCCGAGAAATCGAAG
TCCGGTTTTGAGGATTTGGATCTGTGTCATGGATTGGATAGCATAGAATCGACTATAGAT
TGTTGTTCTAGGACCCAAAGAACGGAGAATGAGGAAGAATTAAAGAAGGGTTACTTGTTT
AAATCGATAGAGGCGAGGTTGCTCAATTCCAACGACGGACTCGAAGAGAGAAAGGAGGAA
TTGGAGGAGTGCTCTGAGCTTGATTTGCTGCTCAAATTATGCGGCGAGGAGGAGGATGAA
GGAGATGGTGTAGAGTGTTTTGGCTTAGGTGACGAATATGGTCTCATTTGTTGTCCCCTT
TGTGGAGCTGATATTTCAGATTTGAGTGGTGACATGCGAGAGGTTCACACTAATGAGTGC
CTTGACAATGAGGAGACTCCAGCTCATGTGGTTACTGCCAATAATGATGTATCTGTTCAG
TGTCCTGGGCAAGTGCTTAATGATTCCCCACGTCAATCTCCTAAAGAGGTTGTCCGCGTA
TTACCTGTTGTGGAATGGTTACAAAATCTTGGACTTGCTAAATATGAAGAAATCTTTGTT
CGGGAGGAGATTGATTGGGACGCTTTAAAATCCCTGACAGAAGAGGATTTATTTAGCATT
GGTGTCACTGCTCTTGGTCCGAGGAAAAAGATTATTAATTCTATTTTGAAGCTAAGAAAG
GAAACTGCCGAGGAAAAAGTAGCTTGGCGAGATGTGACAAAAGTTGTACCTGATGATGCC
GGTACTAAACCAAGCAAGTTGATAACAGATTATTTTATTAGTTCTGTTTCGGAAAGAAAG
AGAGTTTGTGGTACTGGTAGGGCTTGTTCAGATGCTTCCCGTAAGAGAATTCAGAAGAAA
AATCCAGCCAAGAGTGCAAAATCTAAAGATATTCCCGTGTGGTGTTCTGTACCAGGAACA
CCATTCCGAGTGGATGCTTTCAAGTACTTGAGAAGAGATTGTTCTCATTGGTTCCTCAGC
CACTTCCATTTAGATCATTATCAAGGCCTTACTAAGTCCTTCTGTCATGGAAAAATTTAT
TGTTCCTCAATTACGGCAAAGCTTGTTAATCTGAAGATTGGAATCCCATGGGACAAGATA
CAAGTTTTACCCATCAACCAGAAGATCAACATTGCAGGGGTTGATGTCATATGCTTTGAT
GCAAACCATTGCCCGGGTTCCCTGATAATCCTTTTTGAGCCACCCAATGGTAAGGCTGTC
CTGCACACGGGGGATTTCCGATTTTGTGAAGAAATGACAAGGAATTCAATCTTGCAGACT
TGTGGTGTCCACACTGTCATCCTAGATACAACATACTGTGACCCTCAGTATGACTTTCCA
AAACAGGAGGCTGTTATTCAATTTGTTATTGAATCAATACAAGCCGAAACTTTCAACTCG
AAGACCTTGTTTCTCATTGGTAGCTATACTATAGGAAAAGAGAGGTTGTTTGTTGAGGTT
GCTCGTGCTCTACAGAAGAAAGTCTATATCACTGCATCAAAGTTACGCATTTTGGAGTGT
CTGGGGTTTCCTCGAGAAGATATGCAGTTTTTCACACTAAATGAGCAGGAAAGCCAAATT
CATGTTGTGCCTATGTGGACACTGGCTAGCATCAAAAGATTGAAGTATGTTTCTAATCAG
TATGCGGGACGGTACAGTCTTATTGTTGCTTTCTCTCCAACTGGTTGGTCATTTGGTAAA
GGAAAGAAGAAGTCAACTGGAAGTAGGTGGCAGCAGGGTACTATCATCAGGTATGAAGTA
CCATACAGCGAACACAGCAGCTTTTCAGAACTCAAGGAGTTCGTTAAGTTTGTATCTCCT
GTTAACATCATCCCTAGTGTAAATAATCATGGACCTGAATCCAGCAACGCAATGGTCTCG
CGCCTCTTGGACTGA

Peptide Sequence

PEP ID

XP_016477818.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107799239 [Nicotiana tabacum]
Sequence

MAGTSNPKTLNKTLLLSQSQSLPSALADDDDFQDPSPSQLRLSKPTSTIPSRKPLAPYNN
NTASASRSSKKPKQHPLHGGKENLSVVGKCAKGSDSGHKLDSYRPTKKPKQQPLISEKSK
SGFEDLDLCHGLDSIESTIDCCSRTQRTENEEELKKGYLFKSIEARLLNSNDGLEERKEE
LEECSELDLLLKLCGEEEDEGDGVECFGLGDEYGLICCPLCGADISDLSGDMREVHTNEC
LDNEETPAHVVTANNDVSVQCPGQVLNDSPRQSPKEVVRVLPVVEWLQNLGLAKYEEIFV
REEIDWDALKSLTEEDLFSIGVTALGPRKKIINSILKLRKETAEEKVAWRDVTKVVPDDA
GTKPSKLITDYFISSVSERKRVCGTGRACSDASRKRIQKKNPAKSAKSKDIPVWCSVPGT
PFRVDAFKYLRRDCSHWFLSHFHLDHYQGLTKSFCHGKIYCSSITAKLVNLKIGIPWDKI
QVLPINQKINIAGVDVICFDANHCPGSLIILFEPPNGKAVLHTGDFRFCEEMTRNSILQT
CGVHTVILDTTYCDPQYDFPKQEAVIQFVIESIQAETFNSKTLFLIGSYTIGKERLFVEV
ARALQKKVYITASKLRILECLGFPREDMQFFTLNEQESQIHVVPMWTLASIKRLKYVSNQ
YAGRYSLIVAFSPTGWSFGKGKKKSTGSRWQQGTIIRYEVPYSEHSSFSELKEFVKFVSP
VNIIPSVNNHGPESSNAMVSRLLD

Transcript Sequence

Gene sequence data has not been registered.